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| | Scalar (std::shared_ptr< const Grid > grid, const std::string &name) |
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| std::shared_ptr< Scalar > | duplicate () const |
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| int | as_int (int i, int j) const |
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| | Array2D (std::shared_ptr< const Grid > grid, const std::string &short_name, Kind ghostedp, unsigned int stencil_width=1) |
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| double ** | array () |
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| double const *const * | array () const |
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| double & | operator() (int i, int j) |
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| const double & | operator() (int i, int j) const |
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| void | add (double alpha, const Array2D< double > &x) |
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| void | add (double alpha, const Array2D< double > &x, Array2D< double > &result) const |
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| void | copy_from (const Array2D< double > &source) |
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| virtual | ~Array () |
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| std::shared_ptr< const Grid > | grid () const |
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| unsigned int | ndims () const |
| | Returns the number of spatial dimensions.
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| std::vector< int > | shape () const |
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| unsigned int | ndof () const |
| | Returns the number of degrees of freedom per grid point.
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| unsigned int | stencil_width () const |
| | Get the stencil width of the current Array. Returns 0 if ghosts are not available.
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| const std::vector< double > & | levels () const |
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| std::vector< double > | norm (int n) const |
| | Computes the norm of all the components of an Array.
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| void | add (double alpha, const Array &x) |
| | Result: v <- v + alpha * x. Calls VecAXPY.
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| void | shift (double alpha) |
| | Result: v[j] <- v[j] + alpha for all j. Calls VecShift.
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| void | scale (double alpha) |
| | Result: v <- v * alpha. Calls VecScale.
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| petsc::Vec & | vec () const |
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| std::shared_ptr< petsc::DM > | dm () const |
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| void | set_name (const std::string &name) |
| | Sets the variable name to name.
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| const std::string & | get_name () const |
| | Get the name of an Array object.
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| void | define (const File &file, io::Type default_type) const |
| | Define variables corresponding to an Array in a file opened using file.
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| void | read (const std::string &filename, unsigned int time) |
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| void | read (const File &file, unsigned int time) |
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| void | write (const std::string &filename) const |
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| void | write (const File &file) const |
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| void | regrid (const std::string &filename, io::Default default_value) |
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| void | regrid (const File &file, io::Default default_value) |
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| virtual void | begin_access () const |
| | Checks if an Array is allocated and calls DAVecGetArray.
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| virtual void | end_access () const |
| | Checks if an Array is allocated and calls DAVecRestoreArray.
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| void | update_ghosts () |
| | Updates ghost points.
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| std::shared_ptr< petsc::Vec > | allocate_proc0_copy () const |
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| void | put_on_proc0 (petsc::Vec &onp0) const |
| | Puts a local array::Scalar on processor 0.
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| void | get_from_proc0 (petsc::Vec &onp0) |
| | Gets a local Array2 from processor 0.
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| void | set (double c) |
| | Result: v[j] <- c for all j.
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| SpatialVariableMetadata & | metadata (unsigned int N=0) |
| | Returns a reference to the SpatialVariableMetadata object containing metadata for the compoment N.
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| const SpatialVariableMetadata & | metadata (unsigned int N=0) const |
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| int | state_counter () const |
| | Get the object state counter.
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| void | inc_state_counter () |
| | Increment the object state counter.
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| void | set_interpolation_type (InterpolationType type) |
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| void | view (std::vector< std::shared_ptr< petsc::Viewer > > viewers) const |
| | View a 2D vector field using existing PETSc viewers.
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| void | dump (const char filename[]) const |
| | Dumps a variable to a file, overwriting this file's contents (for debugging).
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| uint64_t | fletcher64_serial () const |
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| uint64_t | fletcher64 () const |
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| std::string | checksum (bool serial) const |
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| void | print_checksum (const char *prefix="", bool serial=false) const |
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| virtual | ~PetscAccessible ()=default |
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| stencils::Star< int > | star_int (int i, int j) const |
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| stencils::Box< int > | box_int (int i, int j) const |
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| | Scalar (std::shared_ptr< const Grid > grid, const std::string &name, int width) |
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| stencils::Star< double > | star (int i, int j) const |
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| stencils::Box< double > | box (int i, int j) const |
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| | Array (std::shared_ptr< const Grid > grid, const std::string &name, Kind ghostedp, size_t dof, size_t stencil_width, const std::vector< double > &zlevels) |
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| void | set_begin_access_use_dof (bool flag) |
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| void | read_impl (const File &file, unsigned int time) |
| | Reads appropriate NetCDF variable(s) into an Array.
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| virtual void | regrid_impl (const File &file, io::Default default_value) |
| | Gets an Array from a file file, interpolating onto the current grid.
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| void | write_impl (const File &file) const |
| | Writes an Array to a NetCDF file.
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| void | checkCompatibility (const char *function, const Array &other) const |
| | Checks if two Arrays have compatible sizes, dimensions and numbers of degrees of freedom.
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| void | check_array_indices (int i, int j, unsigned int k) const |
| | Check array indices and warn if they are out of range.
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| void | copy_to_vec (std::shared_ptr< petsc::DM > destination_da, petsc::Vec &destination) const |
| | Copies v to a global vector 'destination'. Ghost points are discarded.
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| void | get_dof (std::shared_ptr< petsc::DM > da_result, petsc::Vec &result, unsigned int start, unsigned int count=1) const |
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| void | set_dof (std::shared_ptr< petsc::DM > da_source, petsc::Vec &source, unsigned int start, unsigned int count=1) |
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| void | put_on_proc0 (petsc::Vec ¶llel, petsc::Vec &onp0) const |
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| void | get_from_proc0 (petsc::Vec &onp0, petsc::Vec ¶llel) const |
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A class for storing and accessing scalar 2D fields.
Definition at line 31 of file Scalar.hh.